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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9098214_9098362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9098214 - 9098362

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGCACC

5'SS Class:

major

3'SS Sequence:

CTCTCCTGGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAG

U12 Branch Point Sequence:

TTGTTTCCAGCC

Flanking Amino Acid:

THLFRLVQNMWPFWLTLVGA

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

67.6

37.6

Major BPS

53.4

0.08

1.7

72.5

43.5

Major PPT

66.5

0.37

60.9

40.2

Minor 5ss

35.3

-1.7

2.8

41.4

39.1

Minor BPS

44.2

-0.4

58.64

40.7

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038179

9096923 - 9108211

11289

ENSAPLT00000011393

9096880 - 9108211

11332