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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9098481_9099389_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9098481 - 9099389

Intron Length:

909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATGTT

5'SS Class:

major

3'SS Sequence:

GTCTCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAC

U12 Branch Point Sequence:

TCCCCCGTGACG

Flanking Amino Acid:

ASFQTAFACLGLLIQQVIFF

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

78.6

35.9

Major BPS

48.6

-0

1.2

40.4

Major PPT

74.6

0.55

0.8

65.4

36.1

Minor 5ss

37.5

-1.4

3.5

49.3

Minor BPS

48.4

-0.2

2.1

55.75

45.8

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038179

9096923 - 9108211

11289

ENSAPLT00000011393

9096880 - 9108211

11332