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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9099524_9099608_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9099524 - 9099608

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCGC

5'SS Class:

major

3'SS Sequence:

CTCTGCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TCATCCCCACCG

Flanking Amino Acid:

AMLLRTLVMHRSNLKALYQG

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

60.9

40.7

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

75.6

0.58

0.8

65.7

36.1

Minor 5ss

29.7

-2.3

3.5

41.4

45.3

Minor BPS

44.7

-0.5

2.1

53.28

46.9

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038179

9096923 - 9108211

11289

ENSAPLT00000011393

9096880 - 9108211

11332