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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9099685_9100401_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9099685 - 9100401

Intron Length:

717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTAACAC

U12 Branch Point Sequence:

TTTGGGGTAACA

Flanking Amino Acid:

TVKHYLWSLEVCYVCSLVLC

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.8

39.3

Major BPS

47.4

-0.1

1.2

55.1

40.5

Major PPT

74.8

0.56

0.7

24.8

Minor 5ss

26.5

-2.7

3.2

34.9

41.5

Minor BPS

42.5

-0.5

2.8

66.36

46.4

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038179

9096923 - 9108211

11289

ENSAPLT00000011393

9096880 - 9108211

11332