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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9100874_9101271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9100874 - 9101271

Intron Length:

398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGATGC

5'SS Class:

major

3'SS Sequence:

TTCTGCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAC

U12 Branch Point Sequence:

CCCCATTTACCC

Flanking Amino Acid:

LCSYIYTPEEGFQLPLKLVL

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

62.9

38.7

Major BPS

66.4

0.41

37.6

Major PPT

78.7

0.65

0.8

31.9

Minor 5ss

31.4

-2.1

3.3

41.3

45.4

Minor BPS

44.7

-0.4

1.8

47.69

42.4

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038179

9096923 - 9108211

11289

ENSAPLT00000011393

9096880 - 9108211

11332