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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9101349_9101529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9101349 - 9101529

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

CGTTTGTCACCT

Flanking Amino Acid:

AVLAKRPRKESPSKLEESLL

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

82.1

0.72

0.7

73.4

31.5

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

43.4

-0.4

2.4

63.97

46.4

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038179

9096923 - 9108211

11289

ENSAPLT00000011393

9096880 - 9108211

11332