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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9101598_9102095_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9101598 - 9102095

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGAAG

5'SS Class:

major

3'SS Sequence:

TGCTTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

GCAGCTTTTACA

Flanking Amino Acid:

TGHEETLDKEVSGRGYYKKY

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.2

69.6

42.7

Major BPS

74.2

0.6

39.4

Major PPT

83.6

0.76

0.8

81.3

30.8

Minor 5ss

37.2

-1.5

3.1

47.8

47.9

Minor BPS

49.4

-0

1.7

56.19

42.9

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038179

9096923 - 9108211

11289

ENSAPLT00000011393

9096880 - 9108211

11332