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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9102222_9102337_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9102222 - 9102337

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CGCGTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

CGGTGTGTGACA

Flanking Amino Acid:

QKVDCPQSPKIYRYYSTLSY

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.9

38.5

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

63.4

0.3

53.1

41.6

Minor 5ss

43.7

-0.7

3.1

59.5

45.4

Minor BPS

41.7

-0.6

2.3

49.82

42.1

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038179

9096923 - 9108211

11289

ENSAPLT00000011393

9096880 - 9108211

11332