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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9102505_9102597_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9102505 - 9102597

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGCCA

5'SS Class:

major

3'SS Sequence:

CTCTGCTCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAG

U12 Branch Point Sequence:

TCTGCTCTATAG

Flanking Amino Acid:

LVPNSSQHSREYWKILALLY

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.2

42.9

Major BPS

59.6

0.24

1.5

57.3

41.7

Major PPT

74.8

0.56

0.8

68.7

31.9

Minor 5ss

30.6

-2.2

3.2

31.7

42.2

Minor BPS

42.3

-0.7

48.64

45.1

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038179

9096923 - 9108211

11289

ENSAPLT00000011393

9096880 - 9108211

11332