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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9102738_9102870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9102738 - 9102870

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTGT

5'SS Class:

major

3'SS Sequence:

CCCGGCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAT

U12 Branch Point Sequence:

CCAGGCTCATTT

Flanking Amino Acid:

GCWNGIPGLLSPANFLEEEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

41.4

Major BPS

0.3

1.3

65.3

43.7

Major PPT

61.4

0.26

0.9

52.6

31.3

Minor 5ss

44.6

-0.6

3.1

65.1

46.2

Minor BPS

38.7

-0.7

2.1

47.99

45.3

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038179

9096923 - 9108211

11289

ENSAPLT00000011393

9096880 - 9108211

11332