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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9102957_9103072_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9102957 - 9103072

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

CTTCTTCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

CTTAGCTAAAAA

Flanking Amino Acid:

LYHACMAPVSLAVLLGLSLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.3

70.1

40.6

Major BPS

61.3

0.28

30.6

Major PPT

79.3

0.66

0.9

76.6

Minor 5ss

38.9

-1.3

2.7

51.9

37.5

Minor BPS

46.3

-0.2

2.2

60.99

44.9

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038179

9096923 - 9108211

11289

ENSAPLT00000011393

9096880 - 9108211

11332