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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9103152_9104318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9103152 - 9104318

Intron Length:

1167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

TTCCCCTCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTAAACT

Flanking Amino Acid:

ETAEPAVPQDNAFPSAIPDC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

69.9

41.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

77.4

0.62

0.7

69.8

Minor 5ss

41.4

-1

2.9

52.4

38.7

Minor BPS

73.6

0.82

1.6

90.89

33.1

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038179

9096923 - 9108211

11289

ENSAPLT00000011393

9096880 - 9108211

11332