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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9112599_9130754_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9112599 - 9130754

Intron Length:

18156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCCGAC

U12 Branch Point Sequence:

AGCCGCCGACCC

Flanking Amino Acid:

SPDLTPWAAQPHRDAVALPP

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

32.9

Major BPS

42.6

-0.4

1.2

33.2

33.9

Major PPT

75.8

0.58

0.8

69.4

31.1

Minor 5ss

29.3

-2.4

2.9

33.7

41.5

Minor BPS

35.1

-1.1

40.7

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043856

9111212 - 9133731

22520

ENSAPLT00000032268

9110935 - 9133943

23009

ENSAPLT00000017858

9110935 - 9134142

23208