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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9130974_9132235_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9130974 - 9132235

Intron Length:

1262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCGGGCTGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

TGGGGTGCCACC

Flanking Amino Acid:

RAIPRELQQREASRYRLALK

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

59.4

0.21

1.1

53.2

41.6

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

30.3

-1.5

2.4

38.03

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032268

9110935 - 9133943

23009

ENSAPLT00000017858

9110935 - 9134142

23208