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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9132432_9132536_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9132432 - 9132536

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGCGTGGT

5'SS Class:

major

3'SS Sequence:

GGGGCTCTGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGAGGAT

U12 Branch Point Sequence:

CGTCCCGCAAGC

Flanking Amino Acid:

MTREEVLDRLATLRGELVAG

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

63.3

43.1

Major BPS

47.8

-0.1

1.5

45.5

47.5

Major PPT

56.7

0.15

1.1

50.4

43.8

Minor 5ss

27.5

-2.6

3.3

31.6

42.7

Minor BPS

41.6

-0.6

2.3

52.68

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043856

9111212 - 9133731

22520

ENSAPLT00000032268

9110935 - 9133943

23009

ENSAPLT00000017858

9110935 - 9134142

23208