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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9133462_9133533_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9133462 - 9133533

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCAGC

5'SS Class:

major

3'SS Sequence:

CGGTGCATCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAT

U12 Branch Point Sequence:

AGCAGCCTAATT

Flanking Amino Acid:

QARGRVMERQLEEAARRWGR

Intron Amino Acid Position:

564

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

63.1

43.4

Major BPS

64.2

0.35

1.3

65.8

39.5

Major PPT

62.4

0.28

54.5

40.2

Minor 5ss

32.9

-2

3.1

42.5

44.6

Minor BPS

45.2

-0.2

2.1

60.57

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043856

9111212 - 9133731

22520

ENSAPLT00000032268

9110935 - 9133943

23009

ENSAPLT00000017858

9110935 - 9134142

23208