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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9143715_9144254_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9143715 - 9144254

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTACGTGGC

5'SS Class:

weak_major

3'SS Sequence:

TCCCGTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GCGTTGTTAATG

Flanking Amino Acid:

GGRCQAVHQNPEVHQNLDLN

Intron Amino Acid Position:

624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.4

53.3

45.2

Major BPS

84.4

0.85

34.5

Major PPT

67.9

0.4

60.8

40.3

Minor 5ss

33.8

-1.8

3.4

47.3

42.1

Minor BPS

-0.2

2.1

50.75

44.3

Associated Gene:

Gene:

SEMA7A

Ensembl Gene ID:

ENSAPLG00000011197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048054

9140987 - 9170089

29103

ENSAPLT00000033251

9140987 - 9163221

22235

ENSAPLT00000011199

9142604 - 9170089

27486