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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9144407_9144785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9144407 - 9144785

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGGTGTC

5'SS Class:

major

3'SS Sequence:

TTCTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAT

U12 Branch Point Sequence:

CCTCGCTCATCC

Flanking Amino Acid:

IQSMILDHERAMLYVGSASR

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.1

66.7

38.9

Major BPS

67.4

0.43

1.2

38.9

Major PPT

89.3

0.88

0.6

22.7

Minor 5ss

-2.3

3.5

34.1

42.2

Minor BPS

42.7

-0.5

2.1

51.6

45.5

Associated Gene:

Gene:

SEMA7A

Ensembl Gene ID:

ENSAPLG00000011197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048054

9140987 - 9170089

29103

ENSAPLT00000033251

9140987 - 9163221

22235

ENSAPLT00000011199

9142604 - 9170089

27486