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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9149964_9150220_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9149964 - 9150220

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTCCT

5'SS Class:

major

3'SS Sequence:

CTTTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CCATCAGCAGCT

Flanking Amino Acid:

GGQCLKPGSPEDNKNFITLV

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

66.6

44.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

86.5

0.82

0.7

81.2

23.9

Minor 5ss

35.9

-1.6

3.3

51.6

44.8

Minor BPS

37.7

-0.8

2.4

54.08

46.9

Associated Gene:

Gene:

SEMA7A

Ensembl Gene ID:

ENSAPLG00000011197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033251

9140987 - 9163221

22235

ENSAPLT00000011651

9142524 - 9170089

27566

ENSAPLT00000011199

9142604 - 9170089

27486

ENSAPLT00000048054

9140987 - 9170089

29103