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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9151048_9162490_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9151048 - 9162490

Intron Length:

11443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGCTGATGAAAA

Flanking Amino Acid:

VNPRIITAPQGAREYAFPRS

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

0.54

0.8

65.3

36.2

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

43.5

-0.5

2.1

55.74

42.5

Associated Gene:

Gene:

SEMA7A

Ensembl Gene ID:

ENSAPLG00000011197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033251

9140987 - 9163221

22235

ENSAPLT00000011651

9142524 - 9170089

27566

ENSAPLT00000011199

9142604 - 9170089

27486

ENSAPLT00000048054

9140987 - 9170089

29103