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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9162663_9167096_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9162663 - 9167096

Intron Length:

4434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TCCATTGTATAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TCCTTCTCCATT

Flanking Amino Acid:

VQKKKCQELQAPDAAVSFTS

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

74.1

38.3

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

59.1

0.21

1.1

64.1

40.6

Minor 5ss

37.2

-1.4

48.3

Minor BPS

48.4

-0

66.82

44.9

Associated Gene:

Gene:

SEMA7A

Ensembl Gene ID:

ENSAPLG00000011197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011199

9142604 - 9170089

27486

ENSAPLT00000048054

9140987 - 9170089

29103

ENSAPLT00000011651

9142524 - 9170089

27566