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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9205676_9205873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9205676 - 9205873

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCGGCTTT

5'SS Class:

major

3'SS Sequence:

TGTCCTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGGAA

U12 Branch Point Sequence:

GGCTGAGTAACT

Flanking Amino Acid:

RVSPAAAVRKGDGVPLTVSM

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.41

1.4

69.7

43.7

Major BPS

50.5

0.01

1.4

51.7

43.9

Major PPT

81.8

0.72

0.8

73.4

37.1

Minor 5ss

43.8

-0.7

3.3

64.6

46.9

Minor BPS

42.7

-0.4

2.5

62.46

Associated Gene:

Gene:

ARID3B

Ensembl Gene ID:

ENSAPLG00000024634

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039168

9182771 - 9212397

29627