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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9214118_9215276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9214118 - 9215276

Intron Length:

1159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTGCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCGCAC

U12 Branch Point Sequence:

AGCTCCGCACGT

Flanking Amino Acid:

RDPARRSRSRSRDRTPPRRR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

-0

1.4

59.2

39.1

Major PPT

68.1

0.41

61.2

40.1

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

38.2

-0.8

2.4

54.82

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043993

9213969 - 9215556

1588