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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9219354_9219699_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9219354 - 9219699

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGCTCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

AGCTGCTAAAAG

Flanking Amino Acid:

DFDTLYNEKKSCEEKSIRNT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

80.1

30.7

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

0.63

0.8

72.2

32.4

Minor 5ss

-1.7

3.2

48.2

47.9

Minor BPS

43.9

-0.6

2.2

47.47

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009493

9218718 - 9221094

2377