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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9220001_9220245_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9220001 - 9220245

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

AAGCTCTGAAGC

Flanking Amino Acid:

EYYRGFTLFQTHENREHLVM

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

69.8

0.49

37.5

Major PPT

88.6

0.87

0.6

84.5

23.1

Minor 5ss

-0.7

3.1

65.1

46.1

Minor BPS

46.7

-0.2

1.7

52.08

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009101

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009493

9218718 - 9221094

2377