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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9246921_9248721_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9246921 - 9248721

Intron Length:

1801

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCGTTTTTA

5'SS Class:

weak_major

3'SS Sequence:

TTGCAGTGAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAG

U12 Branch Point Sequence:

TTGCAGTGAACA

Flanking Amino Acid:

PQGTEDTRVFCITLAVNLVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.3

58.3

36.7

Major BPS

51.1

0.03

1.8

71.4

45.1

Major PPT

59.5

0.21

1.1

54.1

44.5

Minor 5ss

34.3

-1.8

3.9

45.8

44.7

Minor BPS

45.9

-0.3

2.3

62.99

42.7

Associated Gene:

Gene:

SCAMP5

Ensembl Gene ID:

ENSAPLG00000014902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015532

9246877 - 9249771

2895