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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9248943_9249348_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9248943 - 9249348

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGCTTAGC

5'SS Class:

major

3'SS Sequence:

TGGGGGTGCTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TCCCGGGCAGCT

Flanking Amino Acid:

FCFLFWKLPRAWWLPSPCSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.3

0.29

1.1

56.5

42.5

Major BPS

0.52

1.1

77.7

35.3

Major PPT

43.1

-0.4

1.7

47.3

Minor 5ss

30.1

-2.3

2.9

36.9

40.6

Minor BPS

28.1

-1.5

2.6

44.75

46.1

Associated Gene:

Gene:

SCAMP5

Ensembl Gene ID:

ENSAPLG00000014902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015532

9246877 - 9249771

2895