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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9254533_9258765_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9254533 - 9258765

Intron Length:

4233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

AGGGTGTAACTG

Flanking Amino Acid:

LISELLKIPGVEVKVVTTER

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

79.3

31.1

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

68.4

0.41

0.9

61.6

Minor 5ss

29.2

-2.4

2.5

36.8

Minor BPS

31.9

-1.5

2.1

28.59

36.3

Associated Gene:

Gene:

PPCDC

Ensembl Gene ID:

ENSAPLG00000015222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029718

9254380 - 9267917

13538