Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_9263625_9267831_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9263625 - 9267831

Intron Length:

4207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCCC

5'SS Class:

major

3'SS Sequence:

CTCTGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

TGGGCTTCACCC

Flanking Amino Acid:

VVKKLVCGDEGRGAMAEVWT

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.3

70.1

38.5

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

76.4

0.6

0.8

69.4

31.3

Minor 5ss

30.9

-2.2

2.7

37.3

39.8

Minor BPS

45.9

-0.3

1.9

54.69

43.7

Associated Gene:

Gene:

PPCDC

Ensembl Gene ID:

ENSAPLG00000015222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029718

9254380 - 9267917

13538

ENSAPLT00000020542

9254380 - 9267917

13538

ENSAPLT00000015867

9254380 - 9267917

13538