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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9350442_9356427_F

Intron Information:

Intron Rank:

130278

Intron Class:

major

Intron Phase:

Intron Coordinates:

9350442 - 9356427

Intron Length:

5986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

TGGGCTTCACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

40.1

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

79.5

0.66

0.9

73.2

37.2

Minor 5ss

28.4

-2.5

3.5

47.6

Minor BPS

47.2

-0.1

1.9

64.33

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020069

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022700

9348790 - 9357249

8460