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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9421887_9425041_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9421887 - 9425041

Intron Length:

3155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

AATACCTAACAC

Flanking Amino Acid:

TRKISNTTEYKILKPRAEES

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

78.2

0.63

0.8

72.2

32.4

Minor 5ss

40.5

-1.1

Minor BPS

45.5

-0.3

56.18

41.6

Associated Gene:

Gene:

NPTN

Ensembl Gene ID:

ENSAPLG00000015581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028469

9420392 - 9444612

24221

ENSAPLT00000023617

9395616 - 9444612

48997

ENSAPLT00000016257

9416647 - 9444612

27966