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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9451416_9455872_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9451416 - 9455872

Intron Length:

4457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TTGTTTTTGAGC

Flanking Amino Acid:

DCLLLCAKSKNECRMFRVQF

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

71.1

37.5

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

76.2

0.59

40.3

Minor 5ss

32.7

-2

3.1

40.4

45.8

Minor BPS

58.1

0.24

1.6

68.18

38.4

Associated Gene:

Gene:

REC114

Ensembl Gene ID:

ENSAPLG00000015657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016313

9446177 - 9470558

24382