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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9469500_9470138_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9469500 - 9470138

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGCCGGG

5'SS Class:

weak_major

3'SS Sequence:

AATCTTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTTTTTAAAG

Flanking Amino Acid:

DEEQTASSWQVFESNEESGH

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.2

45.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.3

0.48

1.1

71.2

37.9

Minor 5ss

34.4

-1.8

3.6

46.4

Minor BPS

61.3

0.22

1.5

62.12

40.2

Associated Gene:

Gene:

REC114

Ensembl Gene ID:

ENSAPLG00000015657

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016313

9446177 - 9470558

24382