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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9582101_9595031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9582101 - 9595031

Intron Length:

12931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCCGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

GTCCTGCTAACT

Flanking Amino Acid:

DSSRRQYQEKYKQVEQYMSF

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.98

0.8

85.2

31.7

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

70.9

0.47

0.9

64.8

30.7

Minor 5ss

34.9

-1.7

3.2

49.5

46.5

Minor BPS

45.5

-0.2

2.3

66.41

Associated Gene:

Gene:

HCN4

Ensembl Gene ID:

ENSAPLG00000011270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011722

9517839 - 9615438

97600