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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9595179_9596111_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9595179 - 9596111

Intron Length:

933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

ACATTGTCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

TTGTACTCACAT

Flanking Amino Acid:

LGELSEPLREEIINFNCRKL

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

65.8

0.36

63.4

42.1

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

47.4

-0.1

2.1

70.69

45.6

Associated Gene:

Gene:

HCN4

Ensembl Gene ID:

ENSAPLG00000011270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011722

9517839 - 9615438

97600