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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9596353_9598341_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9596353 - 9598341

Intron Length:

1989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GGGTTCTCATTC

Flanking Amino Acid:

TKLADGSYFGEICLLTRGRR

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

81.5

32.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.7

0.67

0.9

70.4

39.9

Minor 5ss

32.1

-2

3.5

48.8

47.4

Minor BPS

46.1

-0.3

1.7

51.59

39.8

Associated Gene:

Gene:

HCN4

Ensembl Gene ID:

ENSAPLG00000011270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011722

9517839 - 9615438

97600