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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9633060_9639823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9633060 - 9639823

Intron Length:

6764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TAAACCACAGCT

Flanking Amino Acid:

NIHQRRNSYRESVRNTPSTD

Intron Amino Acid Position:

1157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.1

30.7

Major BPS

0.3

62.3

30.4

Major PPT

77.8

0.63

0.9

73.4

37.1

Minor 5ss

40.1

-1.1

3.1

49.2

Minor BPS

45.1

-0.2

65.11

44.1

Associated Gene:

Gene:

NEO1

Ensembl Gene ID:

ENSAPLG00000015725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041144

9629902 - 9759568

129667