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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9658229_9659367_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9658229 - 9659367

Intron Length:

1139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGCA

5'SS Class:

major

3'SS Sequence:

ATCAATTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAATTATAATA

Flanking Amino Acid:

YESAVTRPHSDTSEVDLFVI

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

69.1

35.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

63.8

0.31

0.9

54.9

40.4

Minor 5ss

28.9

-2.4

3.5

38.8

46.5

Minor BPS

52.9

0.09

1.6

65.33

34.9

Associated Gene:

Gene:

NEO1

Ensembl Gene ID:

ENSAPLG00000015725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041144

9629902 - 9759568

129667