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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9946349_9947336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9946349 - 9947336

Intron Length:

988

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCATGCAGC

5'SS Class:

major

3'SS Sequence:

GTTCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TGTTCTGTAATT

Flanking Amino Acid:

AMSSAAGYGKSAGASAPLAK

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

42.5

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

77.9

0.63

0.8

69.6

36.7

Minor 5ss

37.2

-1.4

3.9

51.4

39.9

Minor BPS

64.9

0.55

84.22

37.1

Associated Gene:

Gene:

BBS4

Ensembl Gene ID:

ENSAPLG00000015992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016695

9946197 - 9966023

19827