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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9947530_9947890_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9947530 - 9947890

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTCGAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TGTTTCTCGAGA

Flanking Amino Acid:

ESSTLDFDPEMVEVAQKMGA

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

73.5

0.59

81.3

29.9

Major PPT

58.9

0.2

1.2

61.5

39.1

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

51.3

0.03

1.9

66.89

39.6

Associated Gene:

Gene:

BBS4

Ensembl Gene ID:

ENSAPLG00000015992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016695

9946197 - 9966023

19827

ENSAPLT00000016694

9946197 - 9965838

19642