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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9948033_9951491_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9948033 - 9951491

Intron Length:

3459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATGCAT

U12 Branch Point Sequence:

GTCCGGCTAAGT

Flanking Amino Acid:

RSYEQAVALDKCNPLVNLNY

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

84.6

33.2

Major BPS

49.8

-0

1.5

63.4

44.3

Major PPT

75.7

0.58

69.6

41.6

Minor 5ss

41.9

-0.9

3.1

59.6

38.8

Minor BPS

35.8

-1

2.6

54.45

46.8

Associated Gene:

Gene:

BBS4

Ensembl Gene ID:

ENSAPLG00000015992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016695

9946197 - 9966023

19827

ENSAPLT00000016694

9946197 - 9965838

19642