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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9952544_9953751_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9952544 - 9953751

Intron Length:

1208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCAGCA

5'SS Class:

major

3'SS Sequence:

TCTTCTCTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

AGTTCCTCAGCT

Flanking Amino Acid:

ALTYDQGNYKATLAAGSLMQ

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.2

61.4

37.5

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

73.2

0.52

74.3

28.2

Minor 5ss

42.3

-0.8

3.2

57.2

47.1

Minor BPS

62.2

0.46

1.8

80.16

41.2

Associated Gene:

Gene:

BBS4

Ensembl Gene ID:

ENSAPLG00000015992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016695

9946197 - 9966023

19827

ENSAPLT00000016694

9946197 - 9965838

19642