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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9953821_9954665_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9953821 - 9954665

Intron Length:

845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGAAA

5'SS Class:

major

3'SS Sequence:

CTTCTTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TATTCCTGATTT

Flanking Amino Acid:

LTKLGLIYLQLGDYQKAFEH

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

67.9

38.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

86.4

0.82

0.7

79.8

32.1

Minor 5ss

30.6

-2.2

3.3

39.7

45.9

Minor BPS

64.7

0.54

1.7

82.35

38.9

Associated Gene:

Gene:

BBS4

Ensembl Gene ID:

ENSAPLG00000015992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016695

9946197 - 9966023

19827

ENSAPLT00000016694

9946197 - 9965838

19642