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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9954721_9956517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9954721 - 9956517

Intron Length:

1797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGAATA

5'SS Class:

major

3'SS Sequence:

TTTTGTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

TTTTGTGTTACA

Flanking Amino Acid:

KAIEVYKKAIEFSPENTDLL

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

74.5

35.9

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

85.6

0.8

0.9

79.9

37.7

Minor 5ss

38.3

-1.3

46.1

42.9

Minor BPS

46.3

-0.2

2.6

70.62

41.9

Associated Gene:

Gene:

BBS4

Ensembl Gene ID:

ENSAPLG00000015992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016695

9946197 - 9966023

19827

ENSAPLT00000016694

9946197 - 9965838

19642