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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9956646_9958155_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9956646 - 9958155

Intron Length:

1510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCAA

5'SS Class:

major

3'SS Sequence:

GTTGTGTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTC

Flanking Amino Acid:

CYMYLKHFNKARDQLNNALE

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

67.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.3

0.41

1.1

65.8

45.3

Minor 5ss

30.1

-2.3

3.2

38.5

46.5

Minor BPS

62.3

0.36

1.5

70.52

35.3

Associated Gene:

Gene:

BBS4

Ensembl Gene ID:

ENSAPLG00000015992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016695

9946197 - 9966023

19827

ENSAPLT00000016694

9946197 - 9965838

19642