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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9958210_9960038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9958210 - 9960038

Intron Length:

1829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TTTGTCTCATAC

Flanking Amino Acid:

EAAKLDEKDWEISHNLGVCY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

81.3

32.8

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

78.8

0.65

0.9

73.5

36.2

Minor 5ss

32.7

-2

3.4

40.8

45.4

Minor BPS

47.2

-0.2

1.9

63.32

42.2

Associated Gene:

Gene:

BBS4

Ensembl Gene ID:

ENSAPLG00000015992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016695

9946197 - 9966023

19827

ENSAPLT00000016694

9946197 - 9965838

19642