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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10045454_10046060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10045454 - 10046060

Intron Length:

607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CATCTGCTAACA

Flanking Amino Acid:

KTVQILNFRKKKLQNTMETS

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.5

26.8

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

83.9

0.76

0.8

76.2

37.8

Minor 5ss

28.3

-2.5

3.1

31.2

36.7

Minor BPS

44.7

-0.4

2.3

58.23

41.1

Associated Gene:

Gene:

CCDC113

Ensembl Gene ID:

ENSAPLG00000016196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032973

10044994 - 10050667

5674

ENSAPLT00000016893

10044994 - 10050194

5201