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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10048317_10049489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10048317 - 10049489

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGAGCG

5'SS Class:

major

3'SS Sequence:

TTGATTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAT

U12 Branch Point Sequence:

CCTTCCTTGATT

Flanking Amino Acid:

DSPPELLHMLTHGRAKSKMR

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.1

56.1

41.5

Major BPS

0.5

59.3

39.1

Major PPT

78.7

0.65

Minor 5ss

29.5

-2.3

3.5

35.6

42.2

Minor BPS

76.6

0.92

1.2

82.57

39.6

Associated Gene:

Gene:

CCDC113

Ensembl Gene ID:

ENSAPLG00000016196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032973

10044994 - 10050667

5674