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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1006310_1008338_F

Intron Information:

Intron Rank:

145458

Intron Class:

major

Intron Phase:

Intron Coordinates:

1006310 - 1008338

Intron Length:

2029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGGG

5'SS Class:

major

3'SS Sequence:

TCTTTTGATGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AATCAATTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.3

67.1

44.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.1

0.7

0.9

36.2

Minor 5ss

27.5

-2.6

2.9

32.4

42.2

Minor BPS

0.03

1.7

63.39

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018185

1005297 - 1008916

3620