Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_10076515_10076716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10076515 - 10076716

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTCTG

5'SS Class:

major

3'SS Sequence:

GTGTCTCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCCT

U12 Branch Point Sequence:

TTTCCTCTTCCT

Flanking Amino Acid:

AKEAMEHPYFYPVVKEQSQP

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

62.1

43.9

Major BPS

34.6

-0.9

4.2

73.6

41.8

Major PPT

76.7

0.6

0.9

70.1

36.4

Minor 5ss

35.3

-1.7

3.1

51.2

45.1

Minor BPS

38.7

-0.8

3.6

74.37

42.2

Associated Gene:

Gene:

CSNK2A2

Ensembl Gene ID:

ENSAPLG00000016242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016964

10064854 - 10076810

11957